MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5001|JADGKF010000100.1
SEQF5001_00001
Genome Viewer
NA
AA
1170/390
238-1407
D-alanine--D-alanine ligase
SEQF5001|JADGKF010000100.1
SEQF5001_00002
Genome Viewer
NA
AA
1074/358
1394-2467
Thiamine-monophosphate kinase
SEQF5001|JADGKF010000100.1
SEQF5001_00003
Genome Viewer
NA
AA
450/150
2582-3031
hypothetical protein
SEQF5001|JADGKF010000100.1
SEQF5001_00004
Genome Viewer
NA
AA
192/64
3326-3135
50S ribosomal protein L28
SEQF5001|JADGKF010000100.1
SEQF5001_00005
Genome Viewer
NA
AA
1941/647
3612-5552
putative protein
SEQF5001|JADGKF010000100.1
SEQF5001_00006
Genome Viewer
NA
AA
2340/780
5766-8105
ATP-dependent DNA helicase RecG
SEQF5001|JADGKF010000100.1
SEQF5001_00007
Genome Viewer
NA
AA
567/189
8718-8152
Ribosomal RNA small subunit methyltransferase D
SEQF5001|JADGKF010000100.1
SEQF5001_00008
Genome Viewer
NA
AA
504/168
8888-9391
Phosphopantetheine adenylyltransferase
SEQF5001|JADGKF010000101.1
SEQF5001_00009
Genome Viewer
NA
AA
987/329
1260-274
hypothetical protein
SEQF5001|JADGKF010000101.1
SEQF5001_00010
Genome Viewer
NA
AA
2070/690
3705-1636
Neutral endopeptidase
SEQF5001|JADGKF010000101.1
SEQF5001_00011
Genome Viewer
NA
AA
534/178
3900-4433
Ribose-5-phosphate isomerase B
SEQF5001|JADGKF010000101.1
SEQF5001_00012
Genome Viewer
NA
AA
1014/338
4446-5459
Formamidopyrimidine-DNA glycosylase
SEQF5001|JADGKF010000101.1
SEQF5001_00013
Genome Viewer
NA
AA
1302/434
5484-6785
Proline iminopeptidase
SEQF5001|JADGKF010000101.1
SEQF5001_00014
Genome Viewer
NA
AA
594/198
7508-6915
Serine acetyltransferase
SEQF5001|JADGKF010000101.1
SEQF5001_00015
Genome Viewer
NA
AA
930/310
8532-7603
O-acetylserine sulfhydrylase
SEQF5001|JADGKF010000101.1
SEQF5001_00016
Genome Viewer
NA
AA
717/239
9922-9206
hypothetical protein
SEQF5001|JADGKF010000102.1
SEQF5001_00017
Genome Viewer
NA
AA
1311/437
1388-78
Cyclodextrin-binding protein
SEQF5001|JADGKF010000102.1
SEQF5001_00018
Genome Viewer
NA
AA
1227/409
2736-1510
hypothetical protein
SEQF5001|JADGKF010000102.1
SEQF5001_00019
Genome Viewer
NA
AA
1437/479
2815-4251
Deoxyguanosinetriphosphate triphosphohydrolase-like protein
SEQF5001|JADGKF010000102.1
SEQF5001_00020
Genome Viewer
NA
AA
2076/692
4307-6382
DNA primase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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